| Simulator: xpp 8.0 | |
| CPU cores: 1 | |
| RAM: 8 GB | |
| Max time: 20 m |
| Submitted: 2022-02-28 10:22:30 PM | |
| Updated: 2022-02-28 10:26:19 PM | |
Status: Succeeded |
Reproduces figures 5 - 8 from
Dovzhenok, A., C. Park, R.M. Worth, L.L. Rubchinsky. Failure of delayed feedback deep brain stimulation for intermittent pathological synchronization in Parkinson's disease. PLoS One 8(3):e58264, 2013.
Implemented by Andrey Dovzhenok, to whom questions should be addressed.
Usage:
Unzip Dovzhenoketal2013.zip into an empty directory.
Open the folder in Matlab.
3a. Run PCAgenerator1el.m to compute principal components for the arrangement with a single electrode. The ode file with a single electrode arrangement is used. 3b Run PCAgenerator.m to compute principal components for the arrangements with two or three electrodes. Included ode-files correspond to the various electrode arrangements considered in the paper. Specify the name of the ode-file corresponding to the desired electrode arrangements on line 9 in odeFileName variable.
4a. Run Sign_subset_1el.m with the outcome of the step 3a to generate figures 6A and 6B. 4b. Run Sign_subset.m with the outcome of the step 3b to generate figure 5 and the rest of figure 6.
5a. Run Max_plane_1el.m with the outcomes of the step 3a to generate figures 8A and 8B. 5b. Run Max_plane.m with the outcomes of the step 3b to generate figure 7 and the rest of figure 8.