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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
modeldb:235774
Niklas Hübel, Mahshid S. Hosseini-Zare, Jokūbas Žiburkus & Ghanim Ullah. The role of glutamate in neuronal ion homeostasis: A case study of spreading depolarization. PLOS Computational Biology 13, 10: e1005804 (2017).
Uniform time course
Numerical Recipes in C "stiff" Rosenbrock method
XPP
SED-ML
COMBINE/OMEX
XPP 8.0
621d42bdd8a14a834cbf3f0f
Neuron or other electrically excitable cell
Neocortex
Astrocyte
I Potassium
I Sodium
I Cl, leak
I K,leak
I Na, leak
Na/K pump
Glutamate
AMPA
Action Potentials
Homeostasis
ModelDB
Ghanim Ullah
Sense Lab at Yale University
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.
pcbi.1005804.g001.jpg
Joint Photographic Experts Group (JPEG)
pcbi.1005804.g002.jpg
pcbi.1005804.g003.jpg
pcbi.1005804.g004.jpg
pcbi.1005804.g005.jpg
pcbi.1005804.g006.jpg
pcbi.1005804.g007.jpg
pcbi.1005804.g008.jpg
metadata.rdf
OMEX Metadata
readme.html
Hypertext Markup Language (HTML)
screenshot.png
Portable Network Graphics (PNG)
SD.ode
SD.sedml
Simulation Experiment Description Markup Language (SED-ML)