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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
modeldb:206380
Ekaterina O. Morozova, Maxym Myroshnychenko, Denis Zakharov, Matteo di Volo, Boris Gutkin, Christopher C. Lapish & Alexey Kuznetsov. Contribution of synchronized GABAergic neurons to dopaminergic neuron firing and bursting. Journal of Neurophysiology 116, 4: 1900-1923 (2016).
Uniform time course
Numerical Recipes in C "stiff" Rosenbrock method
XPP
SED-ML
COMBINE/OMEX
XPP 8.0
621d42ba87550e369891bb99
Neuron or other electrically excitable cell
Substantia nigra pars compacta DA cell
Ventral tegmental area dopamine neuron
Ventral tegmental area GABA neuron
I K,Ca
I Calcium
I Na,t
I Potassium
Gaba
Glutamate
Dopamine
GabaA
NMDA
AMPA
Action Potentials
Bifurcation
Bursting
Synaptic Convergence
ModelDB
Ekaterina O Morozova
Sense Lab at Yale University
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.
DAandGABAneurons.ode
DAandGABAneurons.sedml
Simulation Experiment Description Markup Language (SED-ML)
DAneuronDB.cpp
C++ source
DAneuronDB.mexa64
Other format
DAneuronDB.mexmaci64
DAneuronDB.mexw64
DAneuronGABApopulationDB.cpp
DAneuronGABApopulationDB.mexa64
DAneuronGABApopulationDB.mexmaci64
DAneuronGABApopulationDB.mexw64
Glu_raster.m
MATLAB
mainDAneuron.m
metadata.rdf
OMEX Metadata
Readme.html
Hypertext Markup Language (HTML)
screenshot1.png
Portable Network Graphics (PNG)
screenshot2.png
screenshot3.png