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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
modeldb:206364
Anatoly Buchin, Sarah Rieubland, Michael Häusser, Boris S. Gutkin & Arnd Roth. Inverse Stochastic Resonance in Cerebellar Purkinje Cells. PLOS Computational Biology 12, 8: e1005000 (2016).
Uniform time course
Euler forward method
XPP
SED-ML
COMBINE/OMEX
XPP 8.0
621d42b8d8a14a834cbf3edd
Synapse
Neuron or other electrically excitable cell
Cerebellum
Cerebellum Purkinje GABA cell
Abstract integrate-and-fire leaky neuron
Abstract integrate-and-fire adaptive exponential (AdEx) neuron
Glutamate
Gaba
Information transfer
Activity Patterns
Synaptic noise
Oscillations
ModelDB
Anatoly Buchin
Sense Lab at Yale University
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.
aeif.m
MATLAB
pcbi.1005000.g001.jpg
Joint Photographic Experts Group (JPEG)
pcbi.1005000.g002.jpg
pcbi.1005000.g003.jpg
pcbi.1005000.g004.jpg
pcbi.1005000.g005.jpg
pcbi.1005000.g006.jpg
pcbi.1005000.g007.jpg
dendrite.m
dendritenodendrite.m
CalciumP.mod
NEURON MODeling Language (NMODL)
CaP.mod
CaT.mod
DS2M0Purk_play_loop.hoc
High Order Calculator (HOC)
DS2M0Purk_play.hoc
DS2M0Purk.hoc
Imean=-160pA.jpg
input_increasing_noise.txt
TEXT
Instructions.txt
K2.mod
KA.mod
KC.mod
Kdr.mod
Kh1.mod
Kh2.mod
KMnew2.mod
Leak.mod
NaF.mod
NaP.mod
Purk2M0.nrn
FI.m
hist_v.m
hist2.m
K.m
matlabserver.m
metadata.rdf
OMEX Metadata
newaEIF_parameters.xls
nodendrite.m
par.txt
parsave.m
psth.m
psthhold.m
psthprob.m
psthprobnew.m
psthsigma.m
ramp_test.m
ramp.m
ramp2 (rough method).m
ramp2.m
README.md
Markdown
sevencells.m
sigma_opt.m
SNRprocessing.m
test_orn_par.m
test_orn.m
test_prob_par.m
test_prob.m
trajectory_increase_noise.fig
MATLAB figure
trajectory_increase_noise.jpg
trajectory_increase_noise.m
trajectory_rand_noise.eps
PostScript
trajectory_rand_noise.fig
trajectory_rand_noise.jpg
trajectory_rand_noise.m
trajectory_rand_noise.png
Portable Network Graphics (PNG)
trajectory.m
v1-v2.mw
Maple worksheet
aEIF_bif.pdf
Adobe Illustrator Artwork (AI)
aEIF.ode
aEIF.ode.auto
AUTO
aEIF.sedml
Simulation Experiment Description Markup Language (SED-ML)
V_w_100.dat
Other format
V_w_100.fig
V_w_100.jpg
V_w_150.dat
V_w_150.fig
V_w_150.jpg
V_w_200.dat
V_w_200.fig
V_w_200.jpg
250_1.dat
250_2.dat
V_w_250.mat
MATLAB data
vb-250.mat
wb-250.mat
aEIF_bif_bassin.fig
aEIF_bif_bassin.jpg
aEIF_bif_diagrams.m
aEIF_bif_diagrams.mat
Basin_trajectory.m
bassin_trajectories.mat
-100-1.dat
-100-2.dat
-200-1.dat
-200-2.dat
bassin-150.dat
BIF-150.auto
BIF-150.eps
curve.dat
vb-100.mat
vb-150.mat
vb-200.mat
vbwb-100.mat
vbwb-150.mat
vbwb-200.mat
wb-100.mat
wb-150.mat
wb-200.mat