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Project
Download File
Open Modeling and Exchange (OMEX)
pcbi.1003941.g001.jpg
Joint Photographic Experts Group (JPEG)
pcbi.1003941.g002.jpg
pcbi.1003941.g003.jpg
pcbi.1003941.g004.jpg
pcbi.1003941.g005.jpg
pcbi.1003941.g006.jpg
pcbi.1003941.g007.jpg
pcbi.1003941.g008.jpg
pcbi.1003941.g009.jpg
pcbi.1003941.g010.jpg
pcbi.1003941.g011.jpg
metadata.rdf
OMEX Metadata
readme.txt
TEXT
spreading-depression-bistable-cont.ode
XPP
spreading-depression-bistable-cont.sedml
Simulation Experiment Description Markup Language (SED-ML)
spreading-depression.ode
spreading-depression.sedml
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
modeldb:167714
Niklas Hübel & Markus A. Dahlem. Dynamics from seconds to hours in Hodgkin-Huxley model with time-dependent ion concentrations and buffer reservoirs. PLoS Computational Biology 10, 12: e1003941 (2014).
Uniform time course
Numerical Recipes in C "stiff" Rosenbrock method
SED-ML
COMBINE/OMEX
XPP 8.0
621d42b5d8a14a834cbf3ea3
Neuron or other electrically excitable cell
I Na,t
I K
I K,leak
Na/K pump
I Cl, leak
I Na, leak
Homeostasis
Spreading depression
ModelDB
Sense Lab at Yale University
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.