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Project
Download File
Open Modeling and Exchange (OMEX)
pcbi.0030221.g001.jpg
Joint Photographic Experts Group (JPEG)
pcbi.0030221.g002.jpg
pcbi.0030221.g003.jpg
pcbi.0030221.g004.jpg
pcbi.0030221.g005.jpg
pcbi.0030221.g006.jpg
pcbi.0030221.g007.jpg
pcbi.0030221.g008.jpg
pcbi.0030221.g009.jpg
pcbi.0030221.g010.jpg
camkII_steady-states.jpg
intro.txt
TEXT
lower_branch.dat
Other format
metadata.rdf
OMEX Metadata
readme.html
Hypertext Markup Language (HTML)
six_sub_protein_cascade_graupner2007_lower_branch.ode
XPP
six_sub_protein_cascade_graupner2007_lower_branch.sedml
Simulation Experiment Description Markup Language (SED-ML)
six_sub_protein_cascade_graupner2007_upper_branch.ode
six_sub_protein_cascade_graupner2007_upper_branch.sedml
upper_branch.dat
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
modeldb:114452
Michael Graupner & Nicolas Brunel. STDP in a bistable synapse model based on CaMKII and associated signaling pathways. PLoS Computational Biology 3, 11: e221 (2007).
Uniform time course
explicit fourth-order Runge-Kutta method
SED-ML
COMBINE/OMEX
XPP 8.0
621d42a587550e369891ba72
Synapse
Hippocampus CA1 pyramidal GLU cell
Detailed Neuronal Models
Synaptic Plasticity
Long-term Synaptic Plasticity
Signaling pathways
ModelDB
Sense Lab at Yale University
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.