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Project
Download File
Open Modeling and Exchange (OMEX)
iYO844.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iYO844
You-Kwan Oh, Bernhard O. Palsson, Sung M. Park, Christophe H. Schilling & Radhakrishnan Mahadevan. Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data. Journal of Biological Chemistry 282, 39: 28791-28799 (2007).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621da834d8a14a834cbf8845
metabolic process
Bacillus subtilis subsp. subtilis str. 168 complete genome
Bacillus subtilis subsp. subtilis str. 168
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.