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Project
Download File
Open Modeling and Exchange (OMEX)
iSFV_1184.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iSFV_1184
J. M. Monk, P. Charusanti, R. K. Aziz, J. A. Lerman, N. Premyodhin, J. D. Orth, A. M. Feist & B. O. Palsson. Genome-scale metabolic reconstructions of multiple Escherichia coli strains highlight strain-specific adaptations to nutritional environments. Proceedings of the National Academy of Sciences 110, 50: 20338-20343 (2013).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d909eb50991044c7a1e7a
metabolic process
Shigella flexneri 5 str. 8401, complete genome
Shigella flexneri 5 str. 8401
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.