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Project
Download File
Open Modeling and Exchange (OMEX)
iJN746.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
PMC2569920-F1.jpg
Joint Photographic Experts Group (JPEG)
PMC2569920-F2.jpg
PMC2569920-F3.jpg
PMC2569920-F4.jpg
PMC2569920-F5.jpg
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iJN746
Juan Nogales, Bernhard Ø Palsson & Ines Thiele. A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory. BMC Systems Biology 2: 79 (2008).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d907b87550e3698921088
metabolic process
Pseudomonas putida KT2440 (g-proteobacteria) genome assembly ASM756v1
Pseudomonas putida
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.