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Project
Download File
Open Modeling and Exchange (OMEX)
iHN637.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
PMC4222884-F1.jpg
Joint Photographic Experts Group (JPEG)
PMC4222884-F2.jpg
PMC4222884-F3.jpg
PMC4222884-F4.jpg
PMC4222884-F5.jpg
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iHN637
Harish Nagarajan, Merve Sahin, Juan Nogales, Haythem Latif, Derek R Lovley, Ali Ebrahim & Karsten Zengler. Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii. Microbial Cell Factories 12: 118 (2013).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d9079d8a14a834cbf76ad
metabolic process
Clostridium ljungdahlii DSM 13528, complete sequence
Clostridium ljungdahlii DSM 13528
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.