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Project
Download File
Open Modeling and Exchange (OMEX)
iEK1008.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
PMC5834885-Fig1.jpg
Joint Photographic Experts Group (JPEG)
PMC5834885-Fig2.jpg
PMC5834885-Fig3.jpg
PMC5834885-Fig4.jpg
PMC5834885-Fig5.jpg
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iEK1008
Erol S. Kavvas, Yara Seif, James T. Yurkovich, Charles Norsigian, Saugat Poudel, William W. Greenwald, Sankha Ghatak, Bernhard O. Palsson & Jonathan M. Monk. Updated and standardized genome-scale reconstruction of Mycobacterium tuberculosis H37Rv, iEK1011, simulates flux states indicative of physiological conditions. BMC Systems Biology 12, 1: 25 (2018).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d904d87550e369892104a
metabolic process
Mycobacterium tuberculosis H37Rv, complete genome
Mycobacterium tuberculosis H37Rv
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.