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Project
Download File
Open Modeling and Exchange (OMEX)
iAM_Pv461.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
PMC5771636-pcbi.1005895.g001.jpg
Joint Photographic Experts Group (JPEG)
PMC5771636-pcbi.1005895.g002.jpg
PMC5771636-pcbi.1005895.g003.jpg
PMC5771636-pcbi.1005895.g004.jpg
PMC5771636-pcbi.1005895.g005.jpg
PMC5771636-pcbi.1005895.g006.jpg
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iAM_Pv461
Alyaa M. Abdel-Haleem, Hooman Hefzi, Katsuhiko Mineta, Xin Gao, Takashi Gojobori, Bernhard O. Palsson, Nathan E. Lewis & Neema Jamshidi. Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting. PLOS Computational Biology 14, 1: e1005895 (2018).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d9006d8a14a834cbf74ff
metabolic process
Plasmodium vivax chromosome 1, whole genome shotgun sequence
Plasmodium vivax
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.