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Project
Download File
Open Modeling and Exchange (OMEX)
iAF987.xml
Systems Biology Markup Language (SBML)
LICENSE
TEXT
metadata.rdf
OMEX Metadata
PMC3998878-pcbi-1003575-g001.jpg
Joint Photographic Experts Group (JPEG)
PMC3998878-pcbi-1003575-g002.jpg
PMC3998878-pcbi-1003575-g003.jpg
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:iAF987
Adam M. Feist, Harish Nagarajan, Amelia-Elena Rotaru, Pier-Luc Tremblay, Tian Zhang, Kelly P. Nevin, Derek R. Lovley & Karsten Zengler. Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens. PLoS Computational Biology 10, 4: e1003575 (2014).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d9003d8a14a834cbf74f1
metabolic process
Geobacter metallireducens GS-15, complete genome
Geobacter metallireducens GS-15
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.