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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
bigg.model:e_coli_core
Jeffrey D. Orth, R. M. T. Fleming & Bernhard Ø. Palsson. Reconstruction and Use of Microbial Metabolic Networks: the Core Escherichia coli Metabolic Model as an Educational Guide. EcoSal Plus 4, 1 (2010).
BiGG
Steady state
flux balance analysis
SBML
SED-ML
COMBINE/OMEX
COBRApy 0.24.0
621d8ffdb50991044c7a1bba
metabolic process
Escherichia coli str. K-12 substr. MG1655, complete genome
Escherichia coli str. K-12 substr. MG1655
Systems Biology Research Group at the University of California, San Diego
Jonathan R. Karr
View project essentials in the liteweight Reproducibility Portal.
e_coli_core.xml
Systems Biology Markup Language (SBML)
e-coli-core.Core-metabolism.escher.json
Escher
e-coli-core.Core-metabolism.png
Portable Network Graphics (PNG)
e-coli-core.Core-metabolism.vg.json
Vega
LICENSE
TEXT
metadata.rdf
OMEX Metadata
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)