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Project
Download File
Open Modeling and Exchange (OMEX)
expected-results.json
JavaScript Object Notation (JSON)
GraphicalAbstract.jpg
Joint Photographic Experts Group (JPEG)
metadata.rdf
OMEX Metadata
reports.h5
Hierarchical Data Format 5 (HDF5)
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
WholeCellRBC_MA_Rates.xml
Systems Biology Markup Language (SBML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
github:SBRG/MASSpy/mass/test/data/models/WholeCellRBC_MA_Rates.xml
Aarash Bordbar, Douglas McCloskey, Daniel C Zielinski, Nikolaus Sonnenschein, Neema Jamshidi & Bernhard O Palsson. Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics. Cell Syst 1, 4 (2015): 283-292.
MIT
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
MASSpy 0.1.5
61fea49c3c41b662ca49b3e8
Homo sapiens
BioSimulations
Jonathan Karr
View project essentials in the liteweight Reproducibility Portal.