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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
smoldyn:S99_more/Min/Min1.txt
Steven S Andrews. Smoldyn: particle-based simulation with rule-based modeling, improved molecular interaction and a library interface. Bioinformatics 33, 5 (2017).
GPL-3.0-only
Uniform time course
Brownian diffusion Smoluchowski method
Smoldyn
SED-ML
COMBINE/OMEX
Smoldyn 2.72
65c775d44dd9c6ee19067b54
Alex Patrie
View project essentials in the liteweight Reproducibility Portal.
metadata.rdf
OMEX Metadata
model.txt
Smoldyn simulation configuration language (Smoldyn)
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)