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Project
Download File
Open Modeling and Exchange (OMEX)
metadata.rdf
OMEX Metadata
model.txt
Smoldyn simulation configuration language (Smoldyn)
simulation.sedml
Simulation Experiment Description Markup Language (SED-ML)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
smoldyn:S99_more/Min/Min1.txt
Steven S Andrews. Smoldyn: particle-based simulation with rule-based modeling, improved molecular interaction and a library interface. Bioinformatics 33, 5 (2017).
GPL-3.0-only
Uniform time course
Brownian diffusion Smoluchowski method
Smoldyn
SED-ML
COMBINE/OMEX
Smoldyn 2.72
65c65c54767b75b8f4bb61ba
Alex Patrie
View project essentials in the liteweight Reproducibility Portal.