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Project
Download File
Open Modeling and Exchange (OMEX)
curation_image.png
Portable Network Graphics (PNG)
curation_notes.txt
TEXT
Figure_5A_class5-biopax2.owl
Resource Description Framework XML (RDF-XML)
Figure_5A_class5-biopax3.owl
Figure_5A_class5-matlab.m
MATLAB
Figure_5A_class5-octave.m
Figure_5A_class5.ode
Figure_5A_class5.xml
Systems Biology Markup Language (SBML)
metadata.rdf
OMEX Metadata
MODEL1712050011-biopax2.owl
MODEL1712050011-biopax3.owl
MODEL1712050011-matlab.m
MODEL1712050011-octave.m
MODEL1712050011.cps
COPASI Markup Language (CopasiML)
MODEL1712050011.ode
MODEL1712050011.sedml
Simulation Experiment Description Markup Language (SED-ML)
MODEL1712050011.xml
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Jette Strasen, Uddipan Sarma, Marcel Jentsch, Stefan Bohn, Caibin Sheng, Daniel Horbelt, Petra Knaus, Stefan Legewie & Alexander Loewer. Cell-specific responses to the cytokine TGFβ are determined by variability in protein levels. Molecular Systems Biology 14, 1 (2018).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
AMICI 0.11.25
647a5f620fb37cdb9ae7629f
BioModels
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