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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Michelle Baker, Bindi S. Brook & Markus R. Owen. Mathematical modelling of cytokines, MMPs and fibronectin fragments in osteoarthritic cartilage. Journal of Mathematical Biology 75, 4 (2017).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
6480c751321246e8866e1640
BioModels
View project essentials in the liteweight Reproducibility Portal.
Baker2017_Fig14-biopax2.owl
Resource Description Framework XML (RDF-XML)
Baker2017_Fig14-biopax3.owl
Baker2017_Fig14-matlab.m
MATLAB
Baker2017_Fig14-octave.m
Baker2017_Fig14.a_1.sedml
Simulation Experiment Description Markup Language (SED-ML)
Baker2017_Fig14.a_2.sedml
Baker2017_Fig14.a_3.sedml
Baker2017_Fig14.b_1.sedml
Baker2017_Fig14.b_2.sedml
Baker2017_Fig14.cps
COPASI Markup Language (CopasiML)
Baker2017_Fig14.ode
Baker2017_Fig14.xml
Systems Biology Markup Language (SBML)
curation_image.png
Portable Network Graphics (PNG)
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
MODEL1704120000_url.xml
MODEL1704120000-biopax2.owl
MODEL1704120000-biopax3.owl
MODEL1704120000-matlab.m
MODEL1704120000-octave.m
MODEL1704120000.m
MODEL1704120000.ode
MODEL1704120000.png
MODEL1704120000.sci
Scilab
MODEL1704120000.svg
Scalable Vector Graphics (SVG)
MODEL1704120000.vcml
Virtual Cell Markup Language (VCML)