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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Kristina M. Giantsos-Adams, Andrew Jia-An Koo, Sukhyun Song, Jiro Sakai, Jagadish Sankaran, Jennifer H. Shin, Guillermo Garcia-Cardena & C. Forbes Dewey. Heparan Sulfate Regrowth Profiles Under Laminar Shear Flow Following Enzymatic Degradation. Cellular and Molecular Bioengineering 6, 2 (2013).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
PySCeS 1.0.0
6488f1776262268786a36247
BioModels
View project essentials in the liteweight Reproducibility Portal.
curation_image.png
Portable Network Graphics (PNG)
curation_notes.txt
TEXT
Giantsos-Adams2013_Figure11.cps
COPASI Markup Language (CopasiML)
Giantsos-Adams2013-biopax2.owl
Resource Description Framework XML (RDF-XML)
Giantsos-Adams2013-biopax3.owl
Giantsos-Adams2013-matlab.m
MATLAB
Giantsos-Adams2013-octave.m
Giantsos-Adams2013.ode
Giantsos-Adams2013.sedml
Simulation Experiment Description Markup Language (SED-ML)
Giantsos-Adams2013.xml
Systems Biology Markup Language (SBML)
metadata.rdf
OMEX Metadata
MODEL1609100000_urn.xml
MODEL1609100000-biopax2.owl
MODEL1609100000-biopax3.owl
MODEL1609100000.m
MODEL1609100000.ode
MODEL1609100000.pdf
Portable Document Format (PDF)
MODEL1609100000.png
MODEL1609100000.svg
Scalable Vector Graphics (SVG)
MODEL1609100000.vcml
Virtual Cell Markup Language (VCML)