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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
John J. Tyson, Bela Novak, Kathy Chen & John Val. Checkpoints in the cell cycle from a modeler's perspective. Progress in Cell Cycle Research 1 (1995).
Katherine C. Chen, Attila Csikasz-Nagy, Bela Gyorffy, John Val, Bela Novak & John J. Tyson. Kinetic analysis of a molecular model of the budding yeast cell cycle. Molecular Biology of the Cell 11, 1 (2000).
B. Novak, A. Csikasz-Nagy, B. Gyorffy, K. Nasmyth & J. J. Tyson. Model scenarios for evolution of the eukaryotic cell cycle. Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences 353, 1378 (1998).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
COPASI 4.36.260
64711c1249c0d898ffdf1ff3
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000675-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000675-biopax3.owl
BIOMD0000000675-matlab.m
MATLAB
BIOMD0000000675-octave.m
BIOMD0000000675.m
BIOMD0000000675.pdf
Portable Document Format (PDF)
BIOMD0000000675.png
Portable Network Graphics (PNG)
BIOMD0000000675.svg
Scalable Vector Graphics (SVG)
BIOMD0000000675.xml
Systems Biology Markup Language (SBML)
curation_image.jpeg
Joint Photographic Experts Group (JPEG)
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
MODEL1006230004.cps
COPASI Markup Language (CopasiML)
MODEL1006230004.sedml
Simulation Experiment Description Markup Language (SED-ML)