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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Alexis R. Barr, Samuel Cooper, Frank S. Heldt, Francesca Butera, Henriette Stoy, Jörg Mansfeld, Béla Novák & Chris Bakal. DNA damage during S-phase mediates the proliferation-quiescence decision in the subsequent G1 via p21 expression. Nature Communications 8 (2017).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
64711bda49c0d898ffdf1b09
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000660_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000660-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000660-biopax3.owl
BIOMD0000000660-matlab.m
MATLAB
BIOMD0000000660.m
BIOMD0000000660.ode
BIOMD0000000660.pdf
Portable Document Format (PDF)
BIOMD0000000660.png
Portable Network Graphics (PNG)
BIOMD0000000660.sci
Scilab
BIOMD0000000660.svg
Scalable Vector Graphics (SVG)
curation_image.jpeg
Joint Photographic Experts Group (JPEG)
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
MODEL1607210001.cps
COPASI Markup Language (CopasiML)
MODEL1607210001.sedml
Simulation Experiment Description Markup Language (SED-ML)