Browse simulation projects
Browse simulator tools
Browse the docs
View full simulation details including customizable plots, files, logs, and more.
Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Anu G. Nair, Omar Gutierrez-Arenas, Olivia Eriksson, Pierre Vincent & Jeanette Hellgren Kotaleski. Sensing Positive versus Negative Reward Signals through Adenylyl Cyclase-Coupled GPCRs in Direct and Indirect Pathway Striatal Medium Spiny Neurons. The Journal of Neuroscience 35, 41 (2015).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
6488f15e6262268786a36093
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000636_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000636_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000636-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000636-biopax3.owl
BIOMD0000000636-matlab.m
MATLAB
BIOMD0000000636-octave.m
BIOMD0000000636.m
BIOMD0000000636.ode
BIOMD0000000636.png
Portable Network Graphics (PNG)
BIOMD0000000636.svg
Scalable Vector Graphics (SVG)
BIOMD0000000636.vcml
Virtual Cell Markup Language (VCML)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata