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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Raibatak Das, Robert B. Nachbar, Leah Edelstein-Keshet, Jeffrey S. Saltzman, Matthew C. Wiener, Ansuman Bagchi, James Bailey, Daniel Coombs, Adam J. Simon, Richard J. Hargreaves & Jacquelynn J. Cook. Modeling effect of a γ-secretase inhibitor on amyloid-β dynamics reveals significant role of an amyloid clearance mechanism. Bulletin of Mathematical Biology 73, 1 (2011).
Uniform time course
LSODA/LSODAR hybrid method
SBML
SED-ML
COMBINE/OMEX
COPASI 4.36.260
6471117a9a62a8be53f89706
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000551_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000551-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000551-biopax3.owl
BIOMD0000000551-matlab.m
MATLAB
BIOMD0000000551-octave.m
BIOMD0000000551.m
BIOMD0000000551.ode
BIOMD0000000551.pdf
Portable Document Format (PDF)
BIOMD0000000551.png
Portable Network Graphics (PNG)
BIOMD0000000551.svg
Scalable Vector Graphics (SVG)
curation_image.png
curation_notes.txt
TEXT
Das2010(final).cps
COPASI Markup Language (CopasiML)
Das2010(final).sedml
Simulation Experiment Description Markup Language (SED-ML)
metadata.rdf
OMEX Metadata