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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Daniele Muraro, Nathan Mellor, Michael P. Pound, Hanna Help, Mikaël Lucas, Jérôme Chopard, Helen M. Byrne, Christophe Godin, T. Charlie Hodgman, John R. King, Tony P. Pridmore, Ykä Helariutta, Malcolm J. Bennett & Anthony Bishopp. Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots. Proceedings of the National Academy of Sciences 111, 2 (2014).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
AMICI 0.11.25
647111060dcacb55678c8218
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000522_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000522_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000522-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000522-biopax3.owl
BIOMD0000000522-matlab.m
MATLAB
BIOMD0000000522.m
BIOMD0000000522.ode
BIOMD0000000522.pdf
Portable Document Format (PDF)
BIOMD0000000522.png
Portable Network Graphics (PNG)
BIOMD0000000522.svg
Scalable Vector Graphics (SVG)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
SM9.zip
Zip
two_cell_bifs.zip