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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Nick I Markevich, Mikhail A Tsyganov, Jan B Hoek & Boris N Kholodenko. Long-range signaling by phosphoprotein waves arising from bistability in protein kinase cascades. Molecular Systems Biology 2 (2006).
Uddipan Sarma & Indira Ghosh. Oscillations in MAPK cascade triggered by two distinct designs of coupled positive and negative feedback loops. BMC Research Notes 5 (2012).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
647a4b3277b6669655060d9f
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000441_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000441_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000441-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000441-biopax3.owl
BIOMD0000000441-matlab.m
MATLAB
BIOMD0000000441.m
BIOMD0000000441.ode
BIOMD0000000441.pdf
Portable Document Format (PDF)
BIOMD0000000441.png
Portable Network Graphics (PNG)
BIOMD0000000441.svg
Scalable Vector Graphics (SVG)
BIOMD0000000441.vcml
Virtual Cell Markup Language (VCML)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata