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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Alistair M. Middleton, Susana Úbeda-Tomás, Jayne Griffiths, Tara Holman, Peter Hedden, Stephen G. Thomas, Andrew L. Phillips, Michael J. Holdsworth, Malcolm J. Bennett, John R. King & Markus R. Owen. Mathematical modeling elucidates the role of transcriptional feedback in gibberellin signaling. Proceedings of the National Academy of Sciences 109, 19 (2012).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
647a4b27195afd5df175eb9a
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000422_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000422_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000422-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000422-biopax3.owl
BIOMD0000000422-matlab.m
MATLAB
BIOMD0000000422-octave.m
BIOMD0000000422.m
BIOMD0000000422.ode
BIOMD0000000422.pdf
Portable Document Format (PDF)
BIOMD0000000422.png
Portable Network Graphics (PNG)
BIOMD0000000422.vcml
Virtual Cell Markup Language (VCML)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata