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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Teva Vernoux, Géraldine Brunoud, Etienne Farcot, Valérie Morin, Hilde Van den Daele, Jonathan Legrand, Marina Oliva, Pradeep Das, Antoine Larrieu, Darren Wells, Yann Guédon, Lynne Armitage, Franck Picard, Soazig Guyomarc'h, Coralie Cellier, Geraint Parry, Rachil Koumproglou, John H Doonan, Mark Estelle, Christophe Godin, Stefan Kepinski, Malcolm Bennett, Lieven De Veylder & Jan Traas. The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Molecular Systems Biology 7 (2011).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
AMICI 0.11.25
647a4b1277b6669655060cba
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000352_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000352_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000352-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000352-biopax3.owl
BIOMD0000000352-matlab.m
MATLAB
BIOMD0000000352-octave.m
BIOMD0000000352.m
BIOMD0000000352.ode
BIOMD0000000352.pdf
Portable Document Format (PDF)
BIOMD0000000352.png
Portable Network Graphics (PNG)
BIOMD0000000352.svg
Scalable Vector Graphics (SVG)
BIOMD0000000352.vcml
Virtual Cell Markup Language (VCML)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata