Browse simulation projects
Browse simulator tools
Browse the docs
View full simulation details including customizable plots, files, logs, and more.
Project
Download File
Open Modeling and Exchange (OMEX)
BIOMD0000000287_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000287_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000287-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000287-biopax3.owl
BIOMD0000000287-matlab.m
MATLAB
BIOMD0000000287.m
BIOMD0000000287.ode
BIOMD0000000287.pdf
Portable Document Format (PDF)
BIOMD0000000287.png
Portable Network Graphics (PNG)
BIOMD0000000287.svg
Scalable Vector Graphics (SVG)
BIOMD0000000287.vcml
Virtual Cell Markup Language (VCML)
curation_image.png
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
João F Passos, Glyn Nelson, Chunfang Wang, Torsten Richter, Cedric Simillion, Carole J Proctor, Satomi Miwa, Sharon Olijslagers, Jennifer Hallinan, Anil Wipat, Gabriele Saretzki, Karl Lenhard Rudolph, Tom B L Kirkwood & Thomas von Zglinicki. Feedback between p21 and reactive oxygen production is necessary for cell senescence. Molecular Systems Biology 6 (2010).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
AMICI 0.11.25
64710ab90dcacb55678b9fea
BioModels
View project essentials in the liteweight Reproducibility Portal.