Browse simulation projects
Browse simulator tools
Browse the docs
View full simulation details including customizable plots, files, logs, and more.
Project
Download File
Open Modeling and Exchange (OMEX)
BIOMD0000000205_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000205_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000205-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000205-biopax3.owl
BIOMD0000000205-matlab.m
MATLAB
BIOMD0000000205-octave.m
BIOMD0000000205.m
BIOMD0000000205.ode
BIOMD0000000205.pdf
Portable Document Format (PDF)
BIOMD0000000205.png
Portable Network Graphics (PNG)
BIOMD0000000205.svg
Scalable Vector Graphics (SVG)
BIOMD0000000205.vcml
Virtual Cell Markup Language (VCML)
curation_image.jpeg
Joint Photographic Experts Group (JPEG)
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Choong Yong Ung, Hu Li, Xiao Hua Ma, Jia Jia, Bao Wen Li, Boon Chuan Low & Yu Zong Chen. Simulation of the regulation of EGFR endocytosis and EGFR-ERK signaling by endophilin-mediated RhoA-EGFR crosstalk. FEBS Letters 582, 15 (2008).
Anatoly Kiyatkin, Edita Aksamitiene, Nick I. Markevich, Nikolay M. Borisov, Jan B. Hoek & Boris N. Kholodenko. Scaffolding protein Grb2-associated binder 1 sustains epidermal growth factor-induced mitogenic and survival signaling by multiple positive feedback loops. Journal of Biological Chemistry 281, 29 (2006).
Frances A Brightman & David A Fell. Differential feedback regulation of the MAPK cascade underlies the quantitative differences in EGF and NGF signalling in PC12 cells. FEBS Letters 482, 3 (2000).
Satoshi Yamada, Takaharu Taketomi & Akihiko Yoshimura. Model analysis of difference between EGF pathway and FGF pathway. Biochemical and Biophysical Research Communications 314, 4 (2004).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
647109940dcacb55678b7e9a
BioModels
View project essentials in the liteweight Reproducibility Portal.