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Project
Download File
Open Modeling and Exchange (OMEX)
Outputs
JavaScript Object Notation (JSON) in BioSimulators simulator schema
Zip of HDF5 and PDF files
Log
JavaScript Object Notation (JSON) in BioSimulators log schema
Charles C. Fink, Boris Slepchenko & Leslie M. Loew. Determination of time-dependent inositol-1,4,5-trisphosphate concentrations during calcium release in a smooth muscle cell. Biophysical Journal 77, 1 (1999).
Charles C. Fink, Boris Slepchenko, Ion I. Moraru, James Schaff, James Watras & Leslie M. Loew. Morphological control of inositol-1,4,5-trisphosphate-dependent signals. Journal of Cell Biology 147, 5 (1999).
Narat J. Eungdamrong & Ravi Iyengar. Compartment-specific feedback loop and regulated trafficking can result in sustained activation of Ras at the Golgi. Biophysical Journal 92, 3 (2007).
Uniform time course
CVODE
SBML
SED-ML
COMBINE/OMEX
tellurium 2.2.8
6488f12dee26f4323c900069
BioModels
View project essentials in the liteweight Reproducibility Portal.
BIOMD0000000161_url.sedml
Simulation Experiment Description Markup Language (SED-ML)
BIOMD0000000161_url.xml
Systems Biology Markup Language (SBML)
BIOMD0000000161-biopax2.owl
Resource Description Framework XML (RDF-XML)
BIOMD0000000161-biopax3.owl
BIOMD0000000161-matlab.m
MATLAB
BIOMD0000000161.m
BIOMD0000000161.ode
BIOMD0000000161.pdf
Portable Document Format (PDF)
BIOMD0000000161.png
Portable Network Graphics (PNG)
BIOMD0000000161.svg
Scalable Vector Graphics (SVG)
BIOMD0000000161.vcml
Virtual Cell Markup Language (VCML)
curation_image.jpeg
Joint Photographic Experts Group (JPEG)
curation_notes.txt
TEXT
metadata.rdf
OMEX Metadata